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A thermostable d-polymerase for mirror-image PCR.

Nucleic acids research (2017-02-06)
Andreas Pech, John Achenbach, Michael Jahnz, Simone Schülzchen, Florian Jarosch, Frank Bordusa, Sven Klussmann
ABSTRACT

Biological evolution resulted in a homochiral world in which nucleic acids consist exclusively of d-nucleotides and proteins made by ribosomal translation of l-amino acids. From the perspective of synthetic biology, however, particularly anabolic enzymes that could build the mirror-image counterparts of biological macromolecules such as l-DNA or l-RNA are lacking. Based on a convergent synthesis strategy, we have chemically produced and characterized a thermostable mirror-image polymerase that efficiently replicates and amplifies mirror-image (l)-DNA. This artificial enzyme, dubbed d-Dpo4-3C, is a mutant of Sulfolobus solfataricus DNA polymerase IV consisting of 352 d-amino acids. d-Dpo4-3C was reliably deployed in classical polymerase chain reactions (PCR) and it was used to assemble a first mirror-image gene coding for the protein Sso7d. We believe that this d-polymerase provides a valuable tool to further investigate the mysteries of biological (homo)chirality and to pave the way for potential novel life forms running on a mirror-image genome.

MATERIALS
Product Number
Brand
Product Description

Sigma-Aldrich
Fmoc-D-Ile-OH, ≥96.0% (HPLC)
Sigma-Aldrich
Fmoc-D-Pro-OH, ≥98.0%
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Fmoc-D-Phe-OH, ≥98.0%
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Fmoc-D-Val-OH, ≥98.0% (HPLC)
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N-(Benzyloxycarbonyloxy)succinimide, 98%
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Fmoc-D-Tyr(tBu)-OH, ≥98.0% (HPLC)
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Fmoc-D-Ser(tBu)-OH, ≥98.0% (TLC)
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Fmoc-D-Lys(Boc)-OH, 98%
Sigma-Aldrich
Fmoc-D-Gln(Trt)-OH, 97%